Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Galdieria sulphuraria SAG21
|
|
AlgaeDB ID
|
GsulphSAG21 |
| Strain/Intraspecific name |
SAG21 |
|
Source
|
Dataset
|
| Source ID |
GCA_006232365.1 |
| NCBI Txid |
130081
|
| Bioproject |
PRJNA512382
|
| Year |
2019 |
| Assembly type |
Genome |
| Assembly level |
Contig |
| Sequencing technology |
PacBio RSII |
| Assembly method |
Canu v.1.6 |
Assembly Statistics
| Assembly Length (bp) |
14,317,600 |
| Assembly BUSCO score |
C: 46.7 (S: 45.1 D: 1.6) F: 10.6 M: 42.7
|
| Protein BUSCO score |
C: 64.7 (S: 62.7 D: 2.0) F: 12.2 M: 23.1
|
| Assembly coverage |
39.5x |
| GC content |
37.92 |
|
Gene count
|
5,956 |
| Contigs |
135 |
| Contig N50 |
158,217 |
Biosample Details
| Biosample |
SAMN10666936 |
| Location |
Taiwan: Yangmingshan
|
| Tissue |
cell culture |