Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Cyanidiophytina
Class
  • Cyanidiophyceae
Order
  • Galdieriales
Family
  • Galdieriaceae

Related assemblies


External Links


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Downloads BLAST search View dataset information

Annotations Explorer: Galdieria sulphuraria 107.79

Overview

Assembly Details

Assembly name Galdieria sulphuraria 107.79
AlgaeDB ID Gsulph107.79
Strain/Intraspecific name 107.79
Source NCBI
Source ID GCA_001704855.1
NCBI Txid 130081
Bioproject PRJNA330791
Year 2016
Assembly type Genome
Assembly level Contig
Sequencing technology ONT MinION
Assembly method Minimap/miniasm/nanopolish 17-Feb-2016

Assembly Statistics

Assembly Length (bp) 12,093,695
Assembly BUSCO score C: 1.2 (S: 1.2 D: 0.0) F: 0.0 M: 98.8
Protein BUSCO score C: 2.0 (S: 2.0 D: 0.0) F: 0.0 M: 98.0
Assembly coverage 50.0x
GC content 41.26
Contigs 117
Contig N50 134,001
Contig L50 35

Biosample Details

Biosample SAMN05426470
Location USA: Sonoma Co., CA
Tissue cell culture
Broad context acidic hot water
Local context ca. 0.1N sulfuric acid, hot water (70-75C)

No annotations are available for this assembly











Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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