Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Galdieria sulphuraria MS1
|
|
AlgaeDB ID
|
GsulphMS1 |
| Strain/Intraspecific name |
MS1 |
|
Source
|
Dataset
|
| Source ID |
GCA_006232515.1 |
| NCBI Txid |
130081
|
| Bioproject |
PRJNA512382
|
| Year |
2019 |
| Assembly type |
Genome |
| Assembly level |
Contig |
| Sequencing technology |
PacBio RSII |
| Assembly method |
Canu v.1.5 |
Assembly Statistics
| Assembly Length (bp) |
14,906,717 |
| Assembly BUSCO score |
C: 66.7 (S: 65.5 D: 1.2) F: 8.2 M: 25.1
|
| Protein BUSCO score |
C: 76.8 (S: 74.1 D: 2.7) F: 8.2 M: 15.0
|
| Assembly coverage |
62.8x |
| GC content |
37.62 |
|
Gene count
|
7,441 |
| Contigs |
129 |
| Contig N50 |
172,087 |
Biosample Details
| Biosample |
SAMN10666933 |
| Location |
USA: Yellowstone National Park, Wyoming
|
| Tissue |
cell culture |