Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Galdieria sulphuraria 5572
|
|
AlgaeDB ID
|
Gsulph5572 |
| Strain/Intraspecific name |
5572 |
|
Source
|
Dataset
|
| Source ID |
GCA_006232475.1 |
| NCBI Txid |
130081
|
| Bioproject |
PRJNA512382
|
| Year |
2019 |
| Assembly type |
Genome |
| Assembly level |
Contig |
| Sequencing technology |
PacBio RSII |
| Assembly method |
Canu v.1.5 |
Assembly Statistics
| Assembly Length (bp) |
14,288,869 |
| Assembly BUSCO score |
C: 76.5 (S: 74.1 D: 2.4) F: 4.3 M: 19.2
|
| Protein BUSCO score |
C: 78.9 (S: 76.5 D: 2.4) F: 7.8 M: 13.3
|
| Assembly coverage |
56.2x |
| GC content |
37.99 |
|
Gene count
|
6,472 |
| Contigs |
108 |
| Contig N50 |
194,602 |
Biosample Details
| Biosample |
SAMN10666932 |
| Location |
USA: Norris Basin, Yellowstone National Park
|
| Tissue |
cell culture |